Just an idea I had... I noticed when you have the Windows export selected there's an option to include all external files. Could this be done for all other exporters like Android/iOS/Html5/Flash?
I know we have binary files, but it's just a pain for me, because of the location I have for all my files. I usually use "Apppath$ + "path location" and if there was an option to include the files u use with expressions it would rock!